Computer Simulation - Research News and Information

Sunday, October 12, 2008

Rate of loop formation in peptides: a simulation study.

3 Oct 2008 Experimental techniques with high temporal and spatial resolution extend our knowledge of how biological macromolecules self-organise and function. Here, we provide an illustration of the convergence between simulation... Read more...

Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors.

3 Oct 2008 Activation of G-protein-coupled receptors (GPCRs) is initiated by conformational changes in the transmembrane (TM) helices and the intra- and extracellular loops induced by ligand binding. Understanding the... Read more...

Hybrid augmented reality simulator: preliminary construct validation of laparoscopic smoothness in a urology residency program.

Oct 2008 PURPOSE: We examined the usefulness, reliability and applicability of the smoothness metric of the ProMIS hybrid simulator (Haptica, Dublin, Ireland) for a urology residency program. MATERIALS AND METHODS: A total of 15... Read more...

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Latest indexed articles for 'Computer Simulation'

These are the very latest articles for this heading:

• Rate of loop formation in peptides: a simulation study. 3 Oct 2008
• Agonist-induced conformational changes in bovine rhodopsin: insight into activation of G-protein-coupled receptors. 3 Oct 2008
• Hybrid augmented reality simulator: preliminary construct validation of laparoscopic smoothness in a urology residency program. Oct 2008
• Beginning of the end of (understanding) the immune response. Oct 2008
• A rationalized set of default postulates that permit a coherent description of the immune system amenable to computer modeling. Oct 2008
• Force-based analysis of multidimensional energy landscapes: application of dynamic force spectroscopy and steered molecular dynamics simulations to an antibody fragment-peptide complex. 19 Sep 2008
• CellML and associated tools and techniques. 13 Sep 2008
• An efficient approach to converting three-dimensional image data into highly accurate computational models. 13 Sep 2008
• SAPHIR: a physiome core model of body fluid homeostasis and blood pressure regulation. 13 Sep 2008
• Chaste: using agile programming techniques to develop computational biology software. 13 Sep 2008
• PROTO-PLASM: parallel language for adaptive and scalable modelling of biosystems. 13 Sep 2008
• Models and computational strategies linking physiological response to molecular networks from large-scale data. 13 Sep 2008
• Knowledge environments representing molecular entities for the virtual physiological human. 13 Sep 2008
• Simulating RNA folding kinetics on approximated energy landscapes. 12 Sep 2008
• Molecular basis for the structural instability of human DJ-1 induced by the L166P mutation associated with Parkinson's disease. 9 Sep 2008
• Dynamical characterization of the heme NO oxygen binding (HNOX) domain. Insight into soluble guanylate cyclase allosteric transition. 9 Sep 2008
• Replica exchange simulations of transient encounter complexes in protein-protein association. 2 Sep 2008
• Sensitivity of knee replacement contact calculations to kinematic measurement errors. Sep 2008
• Folding propensity and biological activity of peptides: the effect of a single stereochemical isomerization on the conformational properties of bombinins in aqueous solution. Sep 2008
• Structural insights for designed alanine-rich helices: comparing NMR helicity measures and conformational ensembles from molecular dynamics simulation. Sep 2008

See a longer list of these articles.

Technical information about 'Computer Simulation'

Definition: Computer-based representation of physical systems and phenomena such as chemical processes.

Descriptor UI: D003198

Alternative terms: Computer Simulation; Computer Simulations; Simulation, Computer; Simulations, Computer; Computer Models; Computer Model; Model, Computer; Computerized Models; Computerized Model; Model, Computerized; Models, Computerized; Models, Computer;

Related Mesh Headings: Models, Theoretical;

Allowable Qualifiers: classification; economics; history; legislation & jurisprudence; standards; supply & distribution; trends; utilization; statistics & numerical data; ethics;

Tree Number: L01.224.160;

History Note: 87

Technical Notes: coord with specific models heading