Sequence Analysis, Protein
Research News and Information

Sunday, November 22, 2009

Predicting structurally conserved contacts for homologous proteins using sequence conservation filters.

30 Oct 2009 The prediction of intramolecular contacts has a useful application in predicting the three-dimensional structures of proteins. The accuracy of the template-based contact prediction methods depends on the quality of the template structures. To reduce ... Read more...

A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life.

10 Oct 2009 BACKGROUND: COG0523 proteins are, like the nickel chaperones of the UreG family, part of the G3E family of GTPases linking them to metallocenter biosynthesis. Even though the first COG0523-encoding gene, cobW, was identified almost 20 years ago, ... Read more...

Ir-CPI, a coagulation contact phase inhibitor from the tick Ixodes ricinus, inhibits thrombus formation without impairing hemostasis.

3 Oct 2009 Blood coagulation starts immediately after damage to the vascular endothelium. This system is essential for minimizing blood loss from an injured blood vessel but also contributes to vascular thrombosis. Although it has long been thought that the ... Read more...

Latest indexed articles for 'Sequence Analysis, Protein'

These are the very latest articles for this heading:

• Predicting structurally conserved contacts for homologous proteins using sequence conservation filters. 30 Oct 2009
• A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life. 10 Oct 2009
• Ir-CPI, a coagulation contact phase inhibitor from the tick Ixodes ricinus, inhibits thrombus formation without impairing hemostasis. 3 Oct 2009
• Amphioxus (Branchiostoma floridae) has orthologs of vertebrate odorant receptors. 3 Oct 2009
• Sequence analysis of the S10 gene of six Bluetongue Virus isolates from India. 29 Sep 2009
• Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information. 29 Sep 2009
• ZifBASE: a database of zinc finger proteins and associated resources. 7 Sep 2009
• UFO: a web server for ultra-fast functional profiling of whole genome protein sequences. 31 Aug 2009
• The ABRF Edman Sequencing Research Group 2008 Study: investigation into homopolymeric amino acid N-terminal sequence tags and their effects on automated Edman degradation. 30 Aug 2009
• Group B Streptococcus induces tyrosine phosphorylation of annexin V and glutathione S-transferase in human umbilical vein endothelial cells. 30 Aug 2009
• From SNPs to pathways: integration of functional effect of sequence variations on models of cell signalling pathways. 25 Aug 2009
• The Lactamase Engineering Database: a critical survey of TEM sequences in public databases. 19 Aug 2009
• Comparative sequence analysis and serological and infectivity studies indicate that cocksfoot mild mosaic virus is a member of the genus Panicovirus. 18 Aug 2009
• Development and evaluation of monoclonal antibodies as probes to assess the differences between two tomato pectin methylesterase isoenzymes. 13 Aug 2009
• CAPIH: a Web interface for comparative analyses and visualization of host-HIV protein-protein interactions. 10 Aug 2009
• Sequence physical properties encode the global organization of protein structure space. 10 Aug 2009
• Comprehensive computational analysis of Hmd enzymes and paralogs in methanogenic Archaea. 9 Aug 2009
• Immunoinformatic comparison of T-cell epitopes contained in novel swine-origin influenza A (H1N1) virus with epitopes in 2008-2009 conventional influenza vaccine. 2 Aug 2009
• The distribution of CTL epitopes in HIV-1 appears to be random, and similar to that of other proteomes. 2 Aug 2009
• A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0. Aug 2009

See a longer list of these articles.

Technical information about 'Sequence Analysis, Protein'

Definition: A process that includes the determination of an amino acid sequence of a protein (or peptide, oligopeptide or peptide fragment) and the information analysis of the sequence.

Descriptor UI: D020539

Alternative terms: Sequence Analysis, Protein; Analyses, Protein Sequence; Analysis, Protein Sequence; Protein Sequence Analyses; Sequence Analyses, Protein; Amino Acid Sequence Analysis; Sequence Analysis, Peptide; Protein Sequence Analysis; Sequence Analyses, Amino Acid; Sequence Analysis, Amino Acid; Amino Acid Sequence Analyses; Peptide Sequence Analysis; Analyses, Peptide Sequence; Analysis, Peptide Sequence; Peptide Sequence Analyses; Sequence Analyses, Peptide; Sequence Determination, Protein; Protein Sequence Determination; Protein Sequence Determinations; Sequence Determinations, Protein; Sequence Determinations, Amino Acid; Peptide Sequence Determination; Peptide Sequence Determinations; Sequence Determination, Peptide; Sequence Determinations, Peptide; Sequence Determination, Amino Acid; Amino Acid Sequence Determination; Amino Acid Sequence Determinations;

Allowable Qualifiers: classification; economics; history; instrumentation; methods; standards; trends; utilization; veterinary; statistics & numerical data; ethics;

Tree Number: E05.393.760.705;

History Note: 2000

Technical Notes: coord with specific protein (or protein group or peptide) with /chem; DF: SEQ ANAL PROTEIN